Portal:Viruses
The Viruses Portal
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Viruses are small infectious agents that can replicate only inside the living cells of an organism. Viruses infect all forms of life, including animals, plants, fungi, bacteria and archaea. They are found in almost every ecosystem on Earth and are the most abundant type of biological entity, with millions of different types, although only about 6,000 viruses have been described in detail. Some viruses cause disease in humans, and others are responsible for economically important diseases of livestock and crops.
Virus particles (known as virions) consist of genetic material, which can be either DNA or RNA, wrapped in a protein coat called the capsid; some viruses also have an outer lipid envelope. The capsid can take simple helical or icosahedral forms, or more complex structures. The average virus is about 1/100 the size of the average bacterium, and most are too small to be seen directly with an optical microscope.
The origins of viruses are unclear: some may have evolved from plasmids, others from bacteria. Viruses are sometimes considered to be a life form, because they carry genetic material, reproduce and evolve through natural selection. However they lack key characteristics (such as cell structure) that are generally considered necessary to count as life. Because they possess some but not all such qualities, viruses have been described as "organisms at the edge of life".
Selected disease
Dengue fever, or breakbone fever, is an infectious tropical disease caused by the dengue virus. Symptoms include fever, headache, muscle and joint pains, and a characteristic skin rash that is similar to measles. Rarely, the disease develops into the life-threatening dengue haemorrhagic fever, resulting in bleeding, low levels of blood platelets and blood plasma leakage, or into dengue shock syndrome, where dangerously low blood pressure occurs.
Dengue is transmitted by several species of Aedes mosquito, mainly A. aegypti. First described in 1779, the incidence of dengue fever has increased dramatically since the Second World War, with around 390 million people infected each year, of whom about 40,000 die. The virus is endemic in more than 120 countries, mainly in Southeast Asia, South Asia and South America. Infection with one of the five viral types usually gives lifelong immunity to that type but only short-term immunity to the others, and subsequent infection with a different type increases the risk of severe complications. Treatment of acute dengue is supportive, using oral or intravenous fluids for mild or moderate disease; blood transfusion may be required in more severe cases. A vaccine against dengue fever is available. Reducing mosquito habitats and limiting exposure to bites are the other main methods of control.
Selected image
Many small icosahedral viruses have capsids made up of multiple copies of just two proteins. The proteins aggregate into units called capsomeres, which have either pentagonal or hexagonal symmetry (as shown here).
Credit: Antares42 (4 September 2009)
In the news
26 February: In the ongoing pandemic of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), more than 110 million confirmed cases, including 2.5 million deaths, have been documented globally since the outbreak began in December 2019. WHO
18 February: Seven asymptomatic cases of avian influenza A subtype H5N8, the first documented H5N8 cases in humans, are reported in Astrakhan Oblast, Russia, after more than 100,0000 hens died on a poultry farm in December. WHO
14 February: Seven cases of Ebola virus disease are reported in Gouécké, south-east Guinea. WHO
7 February: A case of Ebola virus disease is detected in North Kivu Province of the Democratic Republic of the Congo. WHO
4 February: An outbreak of Rift Valley fever is ongoing in Kenya, with 32 human cases, including 11 deaths, since the outbreak started in November. WHO
21 November: The US Food and Drug Administration (FDA) gives emergency-use authorisation to casirivimab/imdevimab, a combination monoclonal antibody (mAb) therapy for non-hospitalised people twelve years and over with mild-to-moderate COVID-19, after granting emergency-use authorisation to the single mAb bamlanivimab earlier in the month. FDA 1, 2
18 November: The outbreak of Ebola virus disease in Équateur Province, Democratic Republic of the Congo, which started in June, has been declared over; a total of 130 cases were recorded, with 55 deaths. UN
Selected article
Interferons are a group of signalling proteins released by host cells in response to viruses and other pathogens. They belong to a large class of proteins known as cytokines: molecules used for communication between cells to trigger the protective defences of the immune system that help to eradicate pathogens. More than twenty distinct interferon genes and proteins have been identified in animals, including humans.
When a cell is infected by a virus, several virus products, including glycoproteins and viral RNA, stimulate the cell to produce and release interferons. This causes nearby cells to heighten their defences against viral infection, and so interferes with viral replication. Some viruses, including Japanese encephalitis virus, dengue type 2 virus, human cytomegalovirus and Kaposi's sarcoma-associated herpesvirus, have evolved ways to resist interferon's antiviral activity. Interferons also have various other functions in regulating the immune system. Interferons and other cytokines are responsible for some symptoms of infection, such as fever, muscle pain and "flu-like symptoms".
Selected outbreak
In the severe acute respiratory syndrome (SARS) outbreak, the first cases of the newly emerged SARS coronavirus were reported in November 2002 from the Chinese Guangdong province. The virus soon spread across Asia, with China, Hong Kong, Taiwan and Singapore being the worst affected countries; a secondary outbreak occurred in Canada. The rapid initial spread of the outbreak has been in part attributed to China's slow response to the early cases. Over 8,000 people were infected, with a case fatality rate of 11%. Those over 65 years had a much higher mortality rate, greater than 55%. The outbreak was contained by July 2003, and no cases have been reported since 2004.
At the time of the outbreak, the immediate source of SARS coronavirus was thought to have been the masked palm civet (Paguma larvata; pictured), which was sold as food in Guangdong markets. The virus was also found in raccoon dogs, ferret badgers and domestic cats. More recent research has suggested that the natural reservoir could be horseshoe bats.
Selected quotation
| “ | The unusual features of the giant Mimivirus revived the popular, yet unresolved question: "Are viruses alive?" The discovery that some of them can get sick adds a new twist to this old debate. | ” |
—Hiroyuki Ogata & Jean-Michel Claverie on the relationship between Sputnik virophage and mimivirus
Recommended articles
Viruses & Subviral agents: bat virome • elephant endotheliotropic herpesvirus • HIV • introduction to viruses • Playa de Oro virus • poliovirus • prion • rotavirus • virus
Diseases: colony collapse disorder • common cold • croup • dengue fever • gastroenteritis • Guillain–Barré syndrome • hepatitis B • hepatitis C • hepatitis E • herpes simplex • HIV/AIDS • influenza • meningitis • myxomatosis • polio • pneumonia • shingles • smallpox
Epidemiology & Interventions: 2007 Bernard Matthews H5N1 outbreak • Coalition for Epidemic Preparedness Innovations • Disease X • 2009 flu pandemic • HIV/AIDS in Malawi • polio vaccine • Spanish flu • West African Ebola virus epidemic
Virus–Host interactions: antibody • host • immune system • parasitism • RNA interference
Methodology: metagenomics
Social & Media: And the Band Played On • Contagion • "Flu Season" • Frank's Cock • Race Against Time: Searching for Hope in AIDS-Ravaged Africa • social history of viruses • "Steve Burdick" • "The Time Is Now" • "What Lies Below"
People: Brownie Mary • Macfarlane Burnet • Bobbi Campbell • Aniru Conteh • people with hepatitis C • HIV-positive people • Bette Korber • Henrietta Lacks • Linda Laubenstein • Barbara McClintock • poliomyelitis survivors • Joseph Sonnabend • Eli Todd • Ryan White
Selected virus
Noroviruses are a genus of non-enveloped, single-stranded RNA viruses in the family Caliciviridae. The positive-sense RNA genome is approximately 7500 nucleotides long. Known noroviruses fall into five different genogroups (GI–GV); three groups infect humans, the other two mice, and cattle and other bovines. All are considered strains of a single species, Norwalk virus.
Noroviruses are extremely contagious, with fewer than 20 virus particles being infectious. They are transmitted directly from person to person and indirectly via contaminated water and food. After infection, the virus replicates in the small intestine, causing acute gastroenteritis, which develops 12–48 hours after exposure and lasts for 24–72 hours. The characteristic symptoms include nausea, forceful vomiting, watery diarrhoea and abdominal pain. Infection is usually self-limiting and rarely severe. Noroviruses cause 18% of acute gastroenteritis episodes in humans, with around 685 million cases and 200,000 deaths every year, mainly in very young, elderly or immunosuppressed people. No vaccine is available. Hand washing with soap and water is effective in reducing transmission.
Did you know?
- ...that the groundnut rosette virus, which causes serious damage to peanut crops in Africa (plant pictured), is spread by the groundnut aphid?
- ...that Oguntola Sapara infiltrated and exposed a secret society in Nigeria that was deliberately spreading smallpox?
- ...that with the 2008 bird flu outbreak in West Bengal, 16,000 birds were destroyed in Itahar, but health workers retreated from villages that refused to kill their birds?
- ...that Preparing for Emergencies was a British Home Office programme to increase public safety after several major disasters, including the Madrid bombings, SARS outbreak and UK foot and mouth crisis?
- ...that Sounds of HIV sets the genome of the HIV/AIDS virus to music?
Selected biography
Sir Frank Macfarlane Burnet (3 September 1899 – 31 August 1985) was an Australian virologist, microbiologist and immunologist. His early virological studies were on bacteriophages, including the pioneering observation that bacteriophages could exist as a stable non-infectious form that multiplies with the bacterial host, later termed the lysogenic cycle.
With the outbreak of World War II, Burnet's focus moved to influenza. Although his efforts to develop a live vaccine proved unsuccessful, he developed assays for the isolation, culture and detection of influenza virus, including haemagglutination assays. Modern methods for producing influenza vaccines are still based on his work improving virus-growing processes in hen's eggs. He also researched influenza virus genetics, examining the genetic control of virulence and demonstrating, several years before influenza virus was shown to have a segmented genome, that the virus recombined at high frequency.
In this month
1 August 1971: The term viroid was coined by Theodor Diener to describe the agent of potato spindle tuber disease
6 August 2007: Maraviroc, first CCR5 receptor antagonist, approved for HIV/AIDS
8 August 2011: UN declared rinderpest eradicated
8 August 2014: WHO declared the Ebola outbreak in West Africa (virus pictured), the most widespread so far, an international public health emergency
18 August 1990: Ryan White Care Act enacted, the largest American federally funded programme for people living with HIV/AIDS
20 August 1780: Start of an outbreak of dengue fever in Philadelphia, USA, which led Benjamin Rush to describe the disease in 1789
26 August 1976: First case of Ebola virus, now the Zaire form
26 August 1998: Fomivirsen, first antisense drug, approved for cytomegalovirus retinitis
Selected intervention
Aciclovir (also acyclovir and sold as Zovirax) is a nucleoside analogue that mimics the nucleoside guanosine. It is active against most viruses in the herpesvirus family, and is mainly used to treat herpes simplex virus infections, chickenpox and shingles. After phosphorylation by viral thymidine kinase and cellular enzymes, the drug inhibits the viral DNA polymerase. Extremely selective and low in cytotoxicity, it was seen as the start of a new era in antiviral therapy. Aciclovir was discovered by Howard Schaeffer and colleagues, and developed by Schaeffer and Gertrude Elion, who was awarded the 1988 Nobel Prize in Medicine in part for its development. Nucleosides isolated from a Caribbean sponge, Cryptotethya crypta, formed the basis for its synthesis. Aciclovir differs from earlier nucleoside analogues in containing only a partial nucleoside structure: the sugar ring is replaced with an open chain. Resistance to the drug is rare in people with a normal immune system.
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